feat(agency): complete WP-0002 Part 3 — E2E tests, docs, sys-medic cross-refs, bugfix

T25: add tests/test_e2e_agency_framework.py — 16 E2E tests covering the full
memory lifecycle (init, show, brief, clear) and protocol list/show commands.

T26: replace agency-framework.md protocols placeholder with full documentation —
location convention, frontmatter schema, CLI reference, sys-medic memory
extensions, and protocols table.

T27: add Related Documents footer to agent-sys-medic.md linking to the k3s
protocol runbook, ADR-002, ADR-003, and agency-framework.md.

Fix: rename CLI command function list() → list_agents() to stop it shadowing
Python's built-in list(). The shadow caused memory_brief() to invoke the
agent-list command instead of constructing a list from dict keys, producing
the agent list as output on every `memory brief` invocation.

All 27 WP-0002 tasks complete. Test suite: 51 passed, 1 skipped.

Co-Authored-By: Claude Sonnet 4.6 <noreply@anthropic.com>

workplans/kaizen-agentic-WP-0002-agency-framework.md

@@ -151,14 +151,14 @@ kaizen-agentic memory clear <agent>     # Wipe memory (with confirmation)
              `memory: enabled|disabled` field (default: enabled)
 
 **Coaching meta-agent**
-- [ ] T12 — Write `agents/agent-coach.md` definition
-- [ ] T13 — Wire `kaizen-agentic memory brief <agent>` to invoke coach logic
-- [ ] T14 — Add coach to agent registry and validate
+- [x] T12 — Write `agents/agent-coach.md` definition
+- [x] T13 — Wire `kaizen-agentic memory brief <agent>` to invoke coach logic
+- [x] T14 — Add coach to agent registry and validate
 
 **Documentation**
-- [ ] T15 — Write `docs/agency-framework.md` explaining the memory model, coach
+- [x] T15 — Write `docs/agency-framework.md` explaining the memory model, coach
              agent, and deployment lifecycle
-- [ ] T16 — Update README to reflect the agency positioning
+- [x] T16 — Update README to reflect the agency positioning
 
 ### Definition of done
 
@@ -211,30 +211,30 @@ sys-medic's memory file gains an additional section beyond the base template:
 ### Tasks
 
 **Protocols convention**
-- [ ] T17 — Write ADR: protocols artifact convention (location, structure, lifecycle)
-- [ ] T18 — Create `agents/protocols/` directory with `README.md` explaining the
+- [x] T17 — Write ADR: protocols artifact convention (location, structure, lifecycle)
+- [x] T18 — Create `agents/protocols/` directory with `README.md` explaining the
              convention
-- [ ] T19 — Move/adapt `sys-medic` k3s health assessment protocol into
+- [x] T19 — Move/adapt `sys-medic` k3s health assessment protocol into
              `agents/protocols/sys-medic/k3s-node-health-assessment.md`
 
 **sys-medic memory integration**
-- [ ] T20 — Add session-start and session-close protocol blocks to `agent-sys-medic.md`
+- [x] T20 — Add session-start and session-close protocol blocks to `agent-sys-medic.md`
              (extending the base protocol from Part 2 with the node-profile extensions)
-- [ ] T21 — Add `## Node Profiles`, `## Recurring Findings`, `## Cleared Issues`
+- [x] T21 — Add `## Node Profiles`, `## Recurring Findings`, `## Cleared Issues`
              extensions to sys-medic memory template
-- [ ] T22 — Update sys-medic prompt to reference its protocol runbook when performing
+- [x] T22 — Update sys-medic prompt to reference its protocol runbook when performing
              structured assessments ("use the k3s protocol if available")
 
 **CLI integration**
-- [ ] T23 — Add `kaizen-agentic protocols list [agent]` and
+- [x] T23 — Add `kaizen-agentic protocols list [agent]` and
              `kaizen-agentic protocols show <agent> <slug>` commands
-- [ ] T24 — Add protocol scaffolding to `kaizen-agentic memory init sys-medic`
+- [x] T24 — Add protocol scaffolding to `kaizen-agentic memory init sys-medic`
 
 **Validation and documentation**
-- [ ] T25 — End-to-end test: deploy sys-medic into a test project, run two simulated
+- [x] T25 — End-to-end test: deploy sys-medic into a test project, run two simulated
              sessions, verify memory accumulates and coach produces a useful brief
-- [ ] T26 — Update `docs/agency-framework.md` with protocols section
-- [ ] T27 — Update sys-medic agent doc with memory and protocol references
+- [x] T26 — Update `docs/agency-framework.md` with protocols section
+- [x] T27 — Update sys-medic agent doc with memory and protocol references
 
 ### Definition of done